FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005005459

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005459
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72872938
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA60700.08.19334955-59
GAGCGTC307500.06.4833319
TCGCCGT80350.06.38812555-59
AGAGCGT360000.05.7190848
AGCGTCG245650.05.666553145
GTCGCCG93850.05.391966355-59
GATCGGA369300.05.39098931
GCCGTAT97650.05.345474755-59
ATCGGAA390600.05.0855432
CGTCGTG226100.05.0663013145
Produced by FastQC (version 0.11.5)