FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005506

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005506
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10885416
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG15700.07.573300445-49
TCTCGTA21000.05.938190540-44
CGTATGC20200.05.886179445-49
GATCGGA68050.05.8841641
TAGATCG26501.0788517E-65.746326145
CGGAAGA76050.05.6243954
ATCGGAA70950.05.620222
CTCGTAT20450.05.60155740-44
TCGGAAG73200.05.54656273
ATGCCGT24000.05.135452345-49
ACACGTC54709.094947E-125.037477145
Produced by FastQC (version 0.11.5)