FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005507

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005507
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10885416
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA15800.07.340620555-59
TCGCCGT18750.06.185696655-59
GCCGTAT20450.06.096843255-59
GAGCGTC67450.06.0185399
AGAGCGT71650.05.9692658
GTCGCCG21850.05.573496355-59
CGTCGTG49651.8189894E-125.4031534145
GATCGGA76450.05.2785751
ATCGGAA77950.05.20795152
TAGATCG26503.8066286E-55.1984344145
CGTATCA25600.05.15368760-64
TCGTGTA50902.7284841E-115.128018145
TGAGACG45701.033186E-95.0757813
AAGAGCG86750.05.0138447
TGGTCGC25500.05.003215350-54
Produced by FastQC (version 0.11.5)