FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005005547

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005547
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73525763
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC373650.06.130886145
TCGGAAG573900.06.0758915145
ATCGGAA563000.06.06476145
AGATCGG585850.05.902461145
GATCGGA545850.05.8701625145
CGGAAGA590800.05.730303145
TAGATCG201500.05.2886333145
ACGTCTG409300.05.083248145
Produced by FastQC (version 0.11.5)