FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005005548

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005548
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73525763
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG374500.06.117327145
CGTCGTG339300.05.8545446145
TCGTGTA349800.05.7824354145
GCGTCGT343450.05.690827140-144
ATCGGAA591550.05.637581145
GCGTCGG69450.05.6369987145
TCGGAAG606200.05.6089725145
GTCGTGT363600.05.582909145
AGATCGG624100.05.575881145
GATCGGA578750.05.5618386145
TAGATCG222100.05.418586145
CGTGTAG362300.05.362816145
CGGAAGA627150.05.2250857145
GAGCGTC457900.05.113971145
Produced by FastQC (version 0.11.5)