FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005560

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005560
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences562959
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCAGAG1950.007326039518.3684231
CCCGAAT3650.001172412513.7385731
CTTCGAT4600.006637145310.9012581
CCCAAAA6200.00564839.24346351
CTTTAAA8559.626418E-48.3785781
CTTTGAT10256.728755E-47.6878561
TTTAAAA15350.00746906835.5863442
Produced by FastQC (version 0.11.5)