FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005561

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005561
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences924153
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCCAGG4550.00573850911.117789
CTCAAAG8659.726146E-48.3711591
GGTAAAT10550.0068092336.86355731
TGCAAGA12500.00498663266.36074642
CTTTGAT14350.00305732186.05523541
Produced by FastQC (version 0.11.5)