FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005563

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005563
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences980843
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGCGG5650.002446580210.2294981
TTCGATC8357.246956E-48.6230272
GTTCGAT8609.3936996E-48.4006791
CGATCTG9502.883151E-48.3205294
CTTCAAG13150.00117408016.5927761
Produced by FastQC (version 0.11.5)