FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005567

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005567
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences566599
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTTGAT10308.81612E-68.9642061
GTAAATA7650.00366310648.3314252
CTTTCCC8250.0072620447.72073036
GTTGCCG8550.0096810647.476221
CTTTTGA9550.0031142367.4370771
Produced by FastQC (version 0.11.5)