FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005576

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005576
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences657290
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACCAAG2950.005472027714.1713616
CCACGAC4957.338792E-512.7410391
CTCTATT4000.002756770212.263251
AATCCGC7553.67692E-49.2285915
CAGCGAT6100.00620289669.1392093
CTTTGAC7750.0045299458.1378251
CGTTCTC8300.0088182457.55521354
CTTTTGT8400.0093242927.50811241
AACAGAT10200.00711322956.83200653
Produced by FastQC (version 0.11.5)