FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005578

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005578
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences630227
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTACACT2206.0297566E-419.7089848
CAACGCT4350.00397655211.6772631
CTTGTAA5752.1420069E-411.3581321
CCCTTAT4500.00512122811.2880211
CTTCGAT6708.782043E-49.7476511
CTTTGTT9803.5690664E-69.6260811
CCATTAT7200.00169511019.0707311
CTTCATT9450.00227680387.67892551
CTTTTAA10100.0043632777.18473771
Produced by FastQC (version 0.11.5)