FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005582

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005582
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences489328
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTCGC1850.005355929519.391786
TCGATTT4503.8460467E-412.7567853
CCCAGTT4800.00879852710.4945821
CTTCCAT10850.0094587366.63252071
CAAAAAA13400.00151421146.4444341
CTTTTCC14700.0042749955.8745181
CTTCTTT18500.0094682735.05684851
Produced by FastQC (version 0.11.5)