FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005583

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005583
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences662345
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AACTCGT3850.001668032513.1114576
CTTTGAG6350.0062394889.1326771
CTCAAGA6400.00665477529.0613291
CTTTGAT9904.0859354E-48.0545141
CTTGTAA8350.0068420157.77266075
Produced by FastQC (version 0.11.5)