FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005584

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005584
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1493386
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCTAA4550.00809814310.6149561
CATTGAG12350.00718374136.14179665
ATTCAAC16205.118416E-45.9589296
CTCAAAA18657.932897E-55.91933251
CCCAAAG15300.0016625095.8625091
ACAATAC17650.00152296465.4695685
CCTGAAT16700.004696775.3710411
Produced by FastQC (version 0.11.5)