FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005590

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005590
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1098536
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTTTGG10951.46951825E-58.6109081
TCTGGGA8558.9196395E-48.4448557
TTCGATA13502.0505281E-46.96720082
TCAGAAA18300.00786154255.1397382
Produced by FastQC (version 0.11.5)