FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005613

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005613
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17466633
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTA112000.037.155727145
ATTGGCG62900.031.00513145
TCTCGTT91050.028.107788145
TCGGAAT78950.024.42651145
TGCCGTG112750.021.026312145
ACGTCTT100400.020.86873145
GCTCATG340400.020.126774145
CGTCTTG88150.019.821049145
CGTATGG51250.018.248524145
CATTGGG137850.018.19706145
GAGCACC313600.016.737648145
ATGCCGG94200.016.700933145
ACACGTG89650.015.931176145
CTCATCG155950.014.4114685145
CTGAACA268050.014.145482145
TCGCGTT19150.014.007635145
AAGAGCC316150.013.9196205145
CACGTCG79450.011.588887145
TTGGCTA143450.011.573556145
TGGCTCG99450.011.372389145
Produced by FastQC (version 0.11.5)