FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005616

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005616
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences530635
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC2258.3120714E-418.7899978
CACACGT2000.00932342717.6156257
AGAGCAC2600.002188771516.2621083
CCTAAAT3103.7294085E-415.9786431
CGAAGGT3951.4867132E-414.2722313
CCTCGAT3900.002117869212.7009731
Produced by FastQC (version 0.11.5)