FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005621

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005621
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1202721
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCCCTA3000.006596981513.7784494
GTGAGAT6801.2921725E-410.2407081
TAAATCT9002.5378162E-48.4198123
CTTTAAT8400.0098734877.46108771
GAAATAG12600.0012404336.56116634
ATATTGT12700.00135647056.5095044
TGATCCG12750.00141806926.4839764
CTTTGAT14400.00491419765.8030691
GATTTCC19000.00391365635.0726835
Produced by FastQC (version 0.11.5)