FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005624

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005624
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1238314
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCCGT5650.002414406310.2462181
GTCGCCT7850.00381115088.2964991
TCCCGTC9400.00228682777.67680172
CTTAAAT14858.8605E-56.8221871
CCAAAAT18653.9673498E-56.2081641
CATGAAG14950.00486405945.8084741
CAAAGAA28758.5315514E-75.5374121
CAAAGAT18650.00165995265.43214371
Produced by FastQC (version 0.11.5)