FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005625

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005625
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences805285
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAAACAC6850.00109340189.5177981
AATGTTC9950.00389885867.2687455
CTTTAAA10400.00590105086.96548271
CTGAAAA20452.2967064E-56.02199171
CAAAAAG20358.4410777E-45.3396331
Produced by FastQC (version 0.11.5)