FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005628

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005628
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1361749
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAATG3850.001878699512.9074692
TATAGGC7300.00235164548.7513617
GTACGAT8050.0054174617.97879081
CCCAAAT9250.00217773887.7152261
CTCAAGC9700.00346795777.35730361
CTCACCG13953.624373E-46.65058041
CTTTAAT17008.9982655E-56.29698661
CTTCCGA12550.0059404676.25517371
CCTCAAA14000.00273142576.1170721
CTTGAAT14000.00273142576.1170721
TGCAAAC15250.00749263545.5861832
CTTGCCC18650.00197776855.35722161
CTTCCGC21654.1407623E-45.27415041
Produced by FastQC (version 0.11.5)