FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005634

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005634
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1036827
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT3600.001147598313.779387
ACACGTC4353.2155783E-413.0327148
CACGTCT5301.2527162E-412.0337439
AGAGCAC5551.8964951E-411.5094453
GCACACG7000.00162523699.11396
AGCACAC6550.0095788418.6682725
GTTTAAA7600.0033357298.4195631
AAGAGCA12450.0057815566.27117822
GCAAGAT12900.0082103196.06266551
Produced by FastQC (version 0.11.5)