FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005663

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005663
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1130983
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTAGGCT4655.468371E-412.2376321
CTTCCGA10150.00556681177.0080031
GATTGTA13050.00138364426.4980065
CATCTAC12750.00775025556.09665875
CATAAAT17106.8615377E-45.823611
CTTAAAA16400.0026428255.63845161
CTTTTCT24451.3621982E-55.52758071
Produced by FastQC (version 0.11.5)