FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005666

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005666
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences768265
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGTTC8358.376407E-48.4977433
CAAACAG11904.3313365E-47.19505641
GTCAAAA10100.00514508367.06445261
GTTTTAT10150.00539788327.02965261
CAAATAT12350.0050298466.35514741
ATTCAAA12850.0075965566.1078661
Produced by FastQC (version 0.11.5)