FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005884

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005884
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences512435
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGGACG1050.00850038227.0684363
ACAACTA3000.00536962814.2109284
CTCGACA3550.001009953714.0121432
CTTGGAT3150.0069475713.6689331
CTTCCAC6550.0087362558.7648121
TCGTGCC4250.00161420465.087305100-104
Produced by FastQC (version 0.11.5)