FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005892

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005892
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1133662
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACCAAA8550.00639853449.105256145
CGACGCA8450.0083912657.5982654
CGGACAA15300.0018350796.9963183145
ATACAAC10350.0065412466.89237938
TACGGAT12150.00424397976.46012352
AGATATT19857.438177E-45.39087634
CTTTCAA19350.00292657785.1921871
CATAAAA18050.00736526735.16855761
Produced by FastQC (version 0.11.5)