FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005893

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005893
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences867228
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCTCAAT7450.00233848.7560681
CTTCAAG12609.832809E-68.0534211
CCTTCAG10550.00674456646.8702171
GTTTATT10700.00773123656.7739051
TCAATAT16553.781347E-46.1001893
CAATATT14350.00320070526.03035074
CTTACTG3700.0093151675.066344365-69
Produced by FastQC (version 0.11.5)