FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005901

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005901
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1250042
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTACGGA5900.0041869059.5870951
CTTTTCC34905.2750693E-116.07777831
CTTTCAC15800.00182210215.81748531
CTATGAA16400.00283906035.60465051
CTTCTAT17300.0053335455.3130791
Produced by FastQC (version 0.11.5)