FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005905

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005905
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences716587
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCTGT7008.444937E-611.4802531
CTTTCGG10951.3391915E-58.6733331
CTCAAAA9853.559944E-48.1585551
CTTCAAT14454.175534E-46.57252551
CTCTTTC14705.143673E-46.46074871
TTGTATT14950.0049920585.79405832
Produced by FastQC (version 0.11.5)