FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005909

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005909
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences834092
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCGGA3200.007509943613.5105151
TCGGTAA7850.0040313318.2443679
TTCTACC8100.0053457277.98991167
ATTCAAA14801.1727008E-57.28765776
CTTCTGA11450.00205275376.92241861
ATGTAAA12550.0054871816.302426
CAAAGAT15400.0070734395.61475941
Produced by FastQC (version 0.11.5)