FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005914

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005914
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences524824
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCGAT5200.00120497911.1354311
TTACCGG5800.00304481089.9616038
AGATTTA6557.448512E-49.9235814
GGATGAA8200.00562153157.9441791
CTTTCTT15101.0942898E-46.7107561
CTTTTTT19701.8500414E-66.6134291
Produced by FastQC (version 0.11.5)