FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005918

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005918
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences492294
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCTCAAT2750.003124892215.4164821
GGGGCAA3150.00786434513.4150869
CAATGCA4909.2097034E-411.4986454
Produced by FastQC (version 0.11.5)