FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005920

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005920
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences952692
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTGAGAT4553.9969233E-412.7010611
GTAGAAC5750.002832522610.05040551
CTTCCAT14509.649193E-77.97101161
TCAATCT10400.0063582786.91234833
CTTGATT11550.0021918566.87974171
GTTGAAA13950.00228812576.21396061
CCTGAAA14250.00290431576.083141
CTTCATT16050.00169992185.85099551
CTTTCAT16500.00236366365.69142251
CTTTGAT15700.0085141485.52132131
TTCCATT18500.0095651775.05374152
Produced by FastQC (version 0.11.5)