FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005925

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005925
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2450511
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTCAA13100.0011041636.62963441
CTTCGGG24654.2518877E-86.45929861
CCCCCCC3856.019834E-56.0342903120-124
GACCCGC15800.00143962995.9338846
CTCGCGG21252.6068633E-45.44929931
GTTCTGA19100.0022401855.30486441
CCTGCTT38506.757E-85.0755451
Produced by FastQC (version 0.11.5)