FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005928

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005928
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences944171
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTCTT7900.0046368938.1175041
TACGGCT8400.0084842567.58863458
CCTCTTT14358.631654E-67.44811631
ATCGTTT10100.00552671177.0129712
CTTCAAT13650.00209071186.2640571
CTTTGTT12850.0077091786.0995341
GATATCA12900.0085395496.0395335
ATTCATT15200.0074017255.59192132
Produced by FastQC (version 0.11.5)