FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005931

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005931
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences743301
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGAATG2900.003996292614.8585577
CTTCAAC9753.8071368E-58.8705621
CTCAAAA9854.29198E-58.7805041
CTTTCAT10851.4153746E-58.6355121
ATTTTGG9200.00193708977.80665165
CTCTTTT13850.00216327446.24461941
Produced by FastQC (version 0.11.5)