FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005938

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005938
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences930411
Sequences flagged as poor quality0
Sequence length100-151
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGAAT12155.6043064E-910.1511071
CTAAAAC6800.00100876539.602281
CAATGAT13802.594245E-46.83447271
CAAAGTT12050.0032695776.6228721
CAATCAT13400.00138512956.49706461
TTGAAGT14100.00261365956.1406683
CTTTAAA17456.9009734E-45.8206751
Produced by FastQC (version 0.11.5)