FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005945

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005945
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences547796
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAGAA1900.00646405218.771131
CTTGATT7151.3917837E-510.9738911
CGATTCC6154.8329498E-410.4014194
CTTTTAT8500.0088405377.55261951
Produced by FastQC (version 0.11.5)