FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005946

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005946
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1705172
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCCGGG7301.738531E-49.9447451
ACACGTC9552.8719738E-48.3243978
CTCAGGT9050.00148446228.0217281
CCCATGG11800.00260931676.7674831
TACCATG13902.975829E-46.759159
GTTGTAA17250.0037797335.47105071
GATTTAC19856.2640035E-45.46079735
CTCAAAG17800.0054694855.30200151
CGAAAAA26203.0766096E-55.2646421
Produced by FastQC (version 0.11.5)