FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005962

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005962
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences628765
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGTGTT2000.00927559317.6319794
TCCGATC3657.536061E-515.4581723
CCCGGGA3250.00922593813.0955241
CCGATCT4403.6835752E-412.8232574
CCTTGGC7200.00208465698.8667611
CCTCCTT8150.0063813367.83321241
GAAATAC10500.008387056.716415
Produced by FastQC (version 0.11.5)