FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005970

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005970
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences527297
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATTGGGT1950.00658663218.709931
CTCAAAT4955.018613E-513.2670421
CTCCTCT4300.003498036411.8786321
GAATACT5400.001754628710.6450562
CGAAATA4750.00824029710.5880244
CTCCATC7000.00124570619.3816941
CTTCAAT8457.130495E-48.6353541
CTTTGAA8658.996215E-48.4356921
CTTTCAA8800.00106680138.2919021
CTTTAAA8450.00684364377.7718181
ATCCATA9450.00250871347.60288956
CATTGAT9900.00339888277.37057921
Produced by FastQC (version 0.11.5)