FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005971

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005971
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences855925
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTGAAAT14507.924125E-67.49309251
ACAGATT12600.00541726976.3102344
ATTTTGT19400.00276006645.2161456
Produced by FastQC (version 0.11.5)