FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005973

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005973
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences574009
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGAAACT3250.00925526113.0889728
CCGAATC4100.003038458812.1046393
AAGGTTA4600.00716855410.7889175
AAACCAA5550.002463636510.2196189
ACGCAAC2600.00643984046.207302110-114
GGAGACA3650.0096615475.05031170-74
Produced by FastQC (version 0.11.5)