FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005976

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005976
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1770711
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACTCA4300.00888593313.1717615145
ATCGATC8400.00796697.64298872
CTAAAAT12859.335288E-46.72816041
CTTTGAT25355.3089207E-75.9684221
CACATTG14400.0037619575.9445473
GTTGGAA18652.808767E-45.79469541
AAATTGT18700.00205733445.34070634
Produced by FastQC (version 0.11.5)