FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005989

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005989
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences840713
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTCAGAA8250.0050808918.0351811
CTTCTGG10750.0069222366.85170461
CATTAAA12550.00426971036.4558891
TTAATTT16152.708125E-46.26007463
CACAAAA13350.0081170816.069021
TTTAATT17407.056243E-45.8103562
CAAGAAA17950.00508187065.3344051
Produced by FastQC (version 0.11.5)