FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005995

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005995
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1286018
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCCCCC1709.045316E-610.02009965-69
GTTCTAT11302.2385642E-47.6208051
CTCCGAT10500.00709862266.83453131
ATCTTGA14757.6280034E-46.2549986
TTTTGTG17308.195362E-45.7432527
CTTGAAA20650.00116587985.21277861
CTTCAAA22155.28641E-45.1837531
CTTTGAA20850.00132546415.16277551
AACATTT18300.0097471955.0459133
Produced by FastQC (version 0.11.5)