FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005996

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005996
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1186472
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTGAA7650.0030438938.5054561
CTCAAAG12801.07450614E-47.34260131
CTTCAAT14756.095974E-46.3718851
CTTTCGC12950.0071903386.1410051
CTCGTCC16503.52392E-46.13423871
TTTAAAT15150.0058374115.7136547
TTCCGAT15300.0065096495.6576387
CAATTTC16650.0026758445.6326284
CTCCTTT22355.4040295E-45.17557951
CGAAAAC18350.00819020255.12181471
CGATTTC19900.00388899265.07524444
Produced by FastQC (version 0.11.5)