FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005998

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005998
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2993673
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCTTAAT15650.0079406265.55737971
CTTGGTT20257.878288E-45.36870341
CCCAAAT20509.284229E-45.30323121
CAAAACT27651.3850555E-55.24249551
CCCAGTT19850.00356312335.1117631
CTTTCAC36004.3270848E-75.03315931
Produced by FastQC (version 0.11.5)