FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006010

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006010
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1041573
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCTG7001.2055309E-410.31094555
ATTGGCG8700.0098072827.46654756
CACTTCT9800.00343129257.3649613
CACAAAA17401.4719444E-67.1849011
CAACAGA10850.00769082976.7778411
CCTCCAT14303.397864E-46.6854161
TCAATTT14304.2681157E-46.5615113
CTTCAAT15257.420523E-46.26894761
AAAGGAT17701.340294E-46.11666252
GAAAAGT17608.224975E-45.7413222
Produced by FastQC (version 0.11.5)