FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005006019

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005006019
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences489540
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACACGTC805.4637145E-542.478428
CACACGT1257.5135136E-427.1861927
CACGTCT1550.002630347621.9243479
AGCACAC1850.007318979618.3709265
AGTCAAC2800.00455893114.5655186
GCTGACG4400.00176724955.052562105-109
Produced by FastQC (version 0.11.5)